Mr. Sisi’s token opponent, Moussa Moustapha Moussa, received just 3 percent of the vote, less than the number of spoiled ballots, state media said.
State media said that about 40 percent of voters cast ballots during the three days of voting that ended Wednesday, down from 47 percent in the 2014 election that formalized Mr. Sisi’s power.
State television said the preliminary results were based on counts in 24 of 27 governorates. It did not say what proportion of the vote had been tallied. Official results are expected on Monday.
Voters were subject to bribes, blandishments and threats in an effort to get them to the polls.
On Wednesday, the election authority repeated a threat to impose a $28 fine on voters who failed to cast their ballot. Voting was extended by an hour on Wednesday after a sandstorm lashed Cairo, keeping some people from polls, officials said.
Coverage of those tactics in the international news media drew harsh criticism from the government and its supporters, who accused reporters of presenting a distorted picture of the election.
Mr. Sisi’s Western allies have been largely silent through the campaign, offering little or no criticism even as journalists were being arrested and the military jailed a former army chief who tried to run against Mr. Sisi.