However, turnout was lower at 41 percent, despite efforts to get as many Egyptians as possible to polling stations during last week’s vote. Sisi had been virtually guaranteed a landslide win, confirmed by early tallies as voting ended on Wednesday.
The election featured only one other candidate, himself an ardent Sisi supporter, after all serious opposition contenders halted their campaigns in January. The main challenger was arrested and his campaign manager beaten up, while other presidential hopefuls pulled out, citing intimidation.
Sisi said he had wanted more candidates to run and that he had had nothing to do with the opposition withdrawals.
The election commission said the vote was free and fair as it gave the results in a televised announcement on Monday.
The lower turnout is a potential setback for Sisi, who suggested before the vote that he saw it as a referendum on his presidency rather than a genuine contest. Turnout in the 2014 vote that won him his first term was 47 percent.
State media had portrayed failure to vote as a betrayal of Egypt. Some voters said they were offered incentives to cast their ballots including money and food, local and international media reported, but did not say who had made the offers.
Officials said that if any such incidents took place they were not state-sponsored and extremely limited.